feat: update component migration orchestrator and add deletion manifest script- Simplify COMPONENT_DIRS to process all TSX components under src/components, excluding specific files.- Introduce EXCLUDED_FILENAMES to filter out non-relevant TSX files.- Enhance documentation for component registry entry format and JSON return structure.- Add a new script to generate a deletion manifest for legacy TSX components with JSON equivalents.

.claude/settings.local.json

@@ -38,7 +38,17 @@
       "Bash(bash:*)",
       "Bash(git restore:*)",
       "Bash(tree:*)",
-      "Bash(powershell:*)"
+      "Bash(powershell:*)",
+      "Bash(git checkout:*)",
+      "Bash(git revert:*)",
+      "Bash(for comp in GitHubBuildStatus LazyD3BarChart StorageSettings LoadingFallback NavigationItem PageHeaderContent SaveIndicator SeedDataManager TreeCard)",
+      "Bash(do grep -r \"from ''@/components/molecules/$comp''\" src/ --files-with-matches)"
     ]
+  },
+  "mcpServers": {
+    "codeql": {
+      "command": "node",
+      "args": ["scripts/mcp/codeql-mcp.cjs"]
+    }
   }
 }

AGENTS.md

@@ -0,0 +1,32 @@
+# Project Agent Guide
+
+This repo is migrating legacy TSX components to JSON-driven components with hooks.
+Use this file as the quick, local guide for automation and review.
+
+## Conversion Workflow (TSX -> JSON)
+1) Identify component under `src/components/atoms|molecules|organisms`.
+2) Read TSX and decide if stateful.
+3) If stateful, extract logic to `src/hooks/use-<component>.ts`.
+4) Create JSON definition in `src/components/json-definitions/<component>.json`.
+5) Add interface in `src/lib/json-ui/interfaces/<component>.ts`.
+6) Export hook (if any) in `src/hooks/index.ts` and `src/lib/json-ui/hooks-registry.ts`.
+7) Export interface in `src/lib/json-ui/interfaces/index.ts`.
+8) Export JSON component in `src/lib/json-ui/json-components.ts`.
+9) Update imports to `@/lib/json-ui/json-components` and delete TSX.
+10) Verify with `npm run build` and `npm run audit:json`.
+
+## CodeQL Helpers
+Custom query pack: `codeql/custom-queries/`
+Optimized DB (source-root `src/`): `codeql-db-optimized/`
+Latest SARIF: `codeql-db-optimized/diagnostic/migration-queries.sarif`
+
+Key queries:
+- Legacy component imports and barrels
+- Hooks usage in components (guides hook extraction)
+- JSX presence in components
+- Imports from json-definitions (should be zero)
+- Migration target folder inventory
+
+## Related Docs
+- `CLAUDE.md` for migration status and CodeQL results
+- `docs/reference/AGENTS.md` for agent architecture background

CLAUDE.md

@@ -287,6 +287,21 @@ npm run components:generate-types
 npm run build
 ```
 
+## CodeQL Migration Helpers (Jan 2026)
+
+Custom query pack lives in `codeql/custom-queries/` with SARIF output at:
+`codeql-db-optimized/diagnostic/migration-queries.sarif`
+
+Latest optimized DB results (source-root `src/`):
+- custom/component-files-with-jsx: 400
+- custom/component-hooks-usage: 98
+- custom/component-custom-hook-usage: 191
+- custom/legacy-component-barrel-imports: 470
+- custom/components-in-migration-target-folders: 21
+- custom/legacy-imports-in-migration-targets: 0
+- custom/imports-json-definitions: 0
+- custom/imports-converted-json-components: 0
+
 ## Key Files
 
 - `json-components-registry.json` - Master registry of all components

codeql-db-optimized/codeql-database.yml

@@ -0,0 +1,13 @@
+---
+sourceLocationPrefix: /Users/rmac/.claude-worktrees/low-code-react-app-b/distracted-hawking/src
+baselineLinesOfCode: 43449
+unicodeNewlines: true
+columnKind: utf16
+primaryLanguage: javascript
+creationMetadata:
+  cliVersion: 2.23.9
+  creationTime: 2026-01-19T09:16:15.632234Z
+buildMode: none
+finalised: true
+overlayBaseDatabase: false
+overlayDatabase: false