From be0439448eb695979e877a0c1cb064369049faad Mon Sep 17 00:00:00 2001
From: "copilot-swe-agent[bot]" <198982749+Copilot@users.noreply.github.com>
Date: Sun, 28 Dec 2025 20:51:52 +0000
Subject: [PATCH] Fix CMake build system to work properly

Co-authored-by: johndoe6345789 <224850594+johndoe6345789@users.noreply.github.com>
---
 CMakeLists.txt                                |  24 +-
 cmake-build/Makefile                          | 382 ++++++++++++++
 .../Testing/Temporary/CTestCostData.txt       |   2 +
 cmake-build/bin/test_bootloader               | Bin 0 -> 16016 bytes
 cmake-build/bootloader/Makefile               | 272 ++++++++++
 cmake-build/kernel/Makefile                   | 488 ++++++++++++++++++
 cmake-build/tests/Makefile                    | 257 +++++++++
 kernel/CMakeLists.txt                         |   2 +
 8 files changed, 1422 insertions(+), 5 deletions(-)
 create mode 100644 cmake-build/Makefile
 create mode 100644 cmake-build/Testing/Temporary/CTestCostData.txt
 create mode 100755 cmake-build/bin/test_bootloader
 create mode 100644 cmake-build/bootloader/Makefile
 create mode 100644 cmake-build/kernel/Makefile
 create mode 100644 cmake-build/tests/Makefile

diff --git a/CMakeLists.txt b/CMakeLists.txt
index d152d2f..0888c4a 100644
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
@@ -53,9 +53,9 @@ endif()
 # Custom target to create bootable image
 find_program(MFORMAT mformat)
 find_program(MCOPY mcopy)
-find_program(MDD mdd)
+find_program(MMD mmd)
 
-if(MFORMAT AND MCOPY)
+if(MFORMAT AND MCOPY AND MMD)
     add_custom_target(image
         COMMAND ${CMAKE_COMMAND} -E make_directory ${CMAKE_BINARY_DIR}/build/iso/EFI/BOOT
         COMMAND ${CMAKE_COMMAND} -E copy 
@@ -65,10 +65,10 @@ if(MFORMAT AND MCOPY)
             ${CMAKE_BINARY_DIR}/kernel/metalos.bin 
             ${CMAKE_BINARY_DIR}/build/iso/
         COMMAND ${CMAKE_COMMAND} -E echo "Creating disk image..."
-        COMMAND dd if=/dev/zero of=${CMAKE_BINARY_DIR}/build/metalos.img bs=1M count=64 2>/dev/null
+        COMMAND dd if=/dev/zero of=${CMAKE_BINARY_DIR}/build/metalos.img bs=1M count=64
         COMMAND ${MFORMAT} -i ${CMAKE_BINARY_DIR}/build/metalos.img -F -v METALOS ::
-        COMMAND ${MDD} -i ${CMAKE_BINARY_DIR}/build/metalos.img ::/EFI
-        COMMAND ${MDD} -i ${CMAKE_BINARY_DIR}/build/metalos.img ::/EFI/BOOT
+        COMMAND ${MMD} -i ${CMAKE_BINARY_DIR}/build/metalos.img ::/EFI
+        COMMAND ${MMD} -i ${CMAKE_BINARY_DIR}/build/metalos.img ::/EFI/BOOT
         COMMAND ${MCOPY} -i ${CMAKE_BINARY_DIR}/build/metalos.img 
             ${CMAKE_BINARY_DIR}/build/iso/EFI/BOOT/bootx64.efi ::/EFI/BOOT/
         COMMAND ${MCOPY} -i ${CMAKE_BINARY_DIR}/build/metalos.img 
@@ -143,6 +143,20 @@ if(QEMU)
             COMMENT "Running MetalOS in QEMU with GDB server (port 1234)"
             VERBATIM
         )
+        
+        add_custom_target(qemu-uefi-test
+            COMMAND ${CMAKE_COMMAND} -E echo "Testing QEMU UEFI boot (no OS image)..."
+            COMMAND ${CMAKE_COMMAND} -E echo "Using OVMF firmware: ${OVMF_FIRMWARE}"
+            COMMAND ${CMAKE_COMMAND} -E echo "This will boot to UEFI shell in nographic mode."
+            COMMAND ${CMAKE_COMMAND} -E echo "You should see UEFI boot messages. Press Ctrl-A then X to exit QEMU."
+            COMMAND ${QEMU}
+                -drive if=pflash,format=raw,readonly=on,file=${OVMF_FIRMWARE}
+                -m 512M
+                -nographic
+                -net none
+            COMMENT "Testing QEMU UEFI setup without OS image"
+            VERBATIM
+        )
     else()
         message(WARNING "OVMF firmware not found - QEMU targets will not be available")
     endif()
diff --git a/cmake-build/Makefile b/cmake-build/Makefile
new file mode 100644
index 0000000..b6e39ff
--- /dev/null
+++ b/cmake-build/Makefile
@@ -0,0 +1,382 @@
+# CMAKE generated file: DO NOT EDIT!
+# Generated by "Unix Makefiles" Generator, CMake Version 3.31
+
+# Default target executed when no arguments are given to make.
+default_target: all
+.PHONY : default_target
+
+# Allow only one "make -f Makefile2" at a time, but pass parallelism.
+.NOTPARALLEL:
+
+#=============================================================================
+# Special targets provided by cmake.
+
+# Disable implicit rules so canonical targets will work.
+.SUFFIXES:
+
+# Disable VCS-based implicit rules.
+% : %,v
+
+# Disable VCS-based implicit rules.
+% : RCS/%
+
+# Disable VCS-based implicit rules.
+% : RCS/%,v
+
+# Disable VCS-based implicit rules.
+% : SCCS/s.%
+
+# Disable VCS-based implicit rules.
+% : s.%
+
+.SUFFIXES: .hpux_make_needs_suffix_list
+
+# Command-line flag to silence nested $(MAKE).
+$(VERBOSE)MAKESILENT = -s
+
+#Suppress display of executed commands.
+$(VERBOSE).SILENT:
+
+# A target that is always out of date.
+cmake_force:
+.PHONY : cmake_force
+
+#=============================================================================
+# Set environment variables for the build.
+
+# The shell in which to execute make rules.
+SHELL = /bin/sh
+
+# The CMake executable.
+CMAKE_COMMAND = /usr/local/bin/cmake
+
+# The command to remove a file.
+RM = /usr/local/bin/cmake -E rm -f
+
+# Escaping for special characters.
+EQUALS = =
+
+# The top-level source directory on which CMake was run.
+CMAKE_SOURCE_DIR = /home/runner/work/MetalOS/MetalOS
+
+# The top-level build directory on which CMake was run.
+CMAKE_BINARY_DIR = /home/runner/work/MetalOS/MetalOS/cmake-build
+
+#=============================================================================
+# Targets provided globally by CMake.
+
+# Special rule for the target test
+test:
+	@$(CMAKE_COMMAND) -E cmake_echo_color "--switch=$(COLOR)" --cyan "Running tests..."
+	/usr/local/bin/ctest --force-new-ctest-process $(ARGS)
+.PHONY : test
+
+# Special rule for the target test
+test/fast: test
+.PHONY : test/fast
+
+# Special rule for the target edit_cache
+edit_cache:
+	@$(CMAKE_COMMAND) -E cmake_echo_color "--switch=$(COLOR)" --cyan "Running CMake cache editor..."
+	/usr/local/bin/ccmake -S$(CMAKE_SOURCE_DIR) -B$(CMAKE_BINARY_DIR)
+.PHONY : edit_cache
+
+# Special rule for the target edit_cache
+edit_cache/fast: edit_cache
+.PHONY : edit_cache/fast
+
+# Special rule for the target rebuild_cache
+rebuild_cache:
+	@$(CMAKE_COMMAND) -E cmake_echo_color "--switch=$(COLOR)" --cyan "Running CMake to regenerate build system..."
+	/usr/local/bin/cmake --regenerate-during-build -S$(CMAKE_SOURCE_DIR) -B$(CMAKE_BINARY_DIR)
+.PHONY : rebuild_cache
+
+# Special rule for the target rebuild_cache
+rebuild_cache/fast: rebuild_cache
+.PHONY : rebuild_cache/fast
+
+# Special rule for the target list_install_components
+list_install_components:
+	@$(CMAKE_COMMAND) -E cmake_echo_color "--switch=$(COLOR)" --cyan "Available install components are: \"Unspecified\""
+.PHONY : list_install_components
+
+# Special rule for the target list_install_components
+list_install_components/fast: list_install_components
+.PHONY : list_install_components/fast
+
+# Special rule for the target install
+install: preinstall
+	@$(CMAKE_COMMAND) -E cmake_echo_color "--switch=$(COLOR)" --cyan "Install the project..."
+	/usr/local/bin/cmake -P cmake_install.cmake
+.PHONY : install
+
+# Special rule for the target install
+install/fast: preinstall/fast
+	@$(CMAKE_COMMAND) -E cmake_echo_color "--switch=$(COLOR)" --cyan "Install the project..."
+	/usr/local/bin/cmake -P cmake_install.cmake
+.PHONY : install/fast
+
+# Special rule for the target install/local
+install/local: preinstall
+	@$(CMAKE_COMMAND) -E cmake_echo_color "--switch=$(COLOR)" --cyan "Installing only the local directory..."
+	/usr/local/bin/cmake -DCMAKE_INSTALL_LOCAL_ONLY=1 -P cmake_install.cmake
+.PHONY : install/local
+
+# Special rule for the target install/local
+install/local/fast: preinstall/fast
+	@$(CMAKE_COMMAND) -E cmake_echo_color "--switch=$(COLOR)" --cyan "Installing only the local directory..."
+	/usr/local/bin/cmake -DCMAKE_INSTALL_LOCAL_ONLY=1 -P cmake_install.cmake
+.PHONY : install/local/fast
+
+# Special rule for the target install/strip
+install/strip: preinstall
+	@$(CMAKE_COMMAND) -E cmake_echo_color "--switch=$(COLOR)" --cyan "Installing the project stripped..."
+	/usr/local/bin/cmake -DCMAKE_INSTALL_DO_STRIP=1 -P cmake_install.cmake
+.PHONY : install/strip
+
+# Special rule for the target install/strip
+install/strip/fast: preinstall/fast
+	@$(CMAKE_COMMAND) -E cmake_echo_color "--switch=$(COLOR)" --cyan "Installing the project stripped..."
+	/usr/local/bin/cmake -DCMAKE_INSTALL_DO_STRIP=1 -P cmake_install.cmake
+.PHONY : install/strip/fast
+
+# The main all target
+all: cmake_check_build_system
+	$(CMAKE_COMMAND) -E cmake_progress_start /home/runner/work/MetalOS/MetalOS/cmake-build/CMakeFiles /home/runner/work/MetalOS/MetalOS/cmake-build//CMakeFiles/progress.marks
+	$(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 all
+	$(CMAKE_COMMAND) -E cmake_progress_start /home/runner/work/MetalOS/MetalOS/cmake-build/CMakeFiles 0
+.PHONY : all
+
+# The main clean target
+clean:
+	$(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 clean
+.PHONY : clean
+
+# The main clean target
+clean/fast: clean
+.PHONY : clean/fast
+
+# Prepare targets for installation.
+preinstall: all
+	$(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 preinstall
+.PHONY : preinstall
+
+# Prepare targets for installation.
+preinstall/fast:
+	$(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 preinstall
+.PHONY : preinstall/fast
+
+# clear depends
+depend:
+	$(CMAKE_COMMAND) -S$(CMAKE_SOURCE_DIR) -B$(CMAKE_BINARY_DIR) --check-build-system CMakeFiles/Makefile.cmake 1
+.PHONY : depend
+
+#=============================================================================
+# Target rules for targets named image
+
+# Build rule for target.
+image: cmake_check_build_system
+	$(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 image
+.PHONY : image
+
+# fast build rule for target.
+image/fast:
+	$(MAKE) $(MAKESILENT) -f CMakeFiles/image.dir/build.make CMakeFiles/image.dir/build
+.PHONY : image/fast
+
+#=============================================================================
+# Target rules for targets named qemu
+
+# Build rule for target.
+qemu: cmake_check_build_system
+	$(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 qemu
+.PHONY : qemu
+
+# fast build rule for target.
+qemu/fast:
+	$(MAKE) $(MAKESILENT) -f CMakeFiles/qemu.dir/build.make CMakeFiles/qemu.dir/build
+.PHONY : qemu/fast
+
+#=============================================================================
+# Target rules for targets named qemu-debug
+
+# Build rule for target.
+qemu-debug: cmake_check_build_system
+	$(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 qemu-debug
+.PHONY : qemu-debug
+
+# fast build rule for target.
+qemu-debug/fast:
+	$(MAKE) $(MAKESILENT) -f CMakeFiles/qemu-debug.dir/build.make CMakeFiles/qemu-debug.dir/build
+.PHONY : qemu-debug/fast
+
+#=============================================================================
+# Target rules for targets named qemu-gdb
+
+# Build rule for target.
+qemu-gdb: cmake_check_build_system
+	$(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 qemu-gdb
+.PHONY : qemu-gdb
+
+# fast build rule for target.
+qemu-gdb/fast:
+	$(MAKE) $(MAKESILENT) -f CMakeFiles/qemu-gdb.dir/build.make CMakeFiles/qemu-gdb.dir/build
+.PHONY : qemu-gdb/fast
+
+#=============================================================================
+# Target rules for targets named qemu-uefi-test
+
+# Build rule for target.
+qemu-uefi-test: cmake_check_build_system
+	$(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 qemu-uefi-test
+.PHONY : qemu-uefi-test
+
+# fast build rule for target.
+qemu-uefi-test/fast:
+	$(MAKE) $(MAKESILENT) -f CMakeFiles/qemu-uefi-test.dir/build.make CMakeFiles/qemu-uefi-test.dir/build
+.PHONY : qemu-uefi-test/fast
+
+#=============================================================================
+# Target rules for targets named bootloader_obj
+
+# Build rule for target.
+bootloader_obj: cmake_check_build_system
+	$(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 bootloader_obj
+.PHONY : bootloader_obj
+
+# fast build rule for target.
+bootloader_obj/fast:
+	$(MAKE) $(MAKESILENT) -f bootloader/CMakeFiles/bootloader_obj.dir/build.make bootloader/CMakeFiles/bootloader_obj.dir/build
+.PHONY : bootloader_obj/fast
+
+#=============================================================================
+# Target rules for targets named bootloader_so
+
+# Build rule for target.
+bootloader_so: cmake_check_build_system
+	$(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 bootloader_so
+.PHONY : bootloader_so
+
+# fast build rule for target.
+bootloader_so/fast:
+	$(MAKE) $(MAKESILENT) -f bootloader/CMakeFiles/bootloader_so.dir/build.make bootloader/CMakeFiles/bootloader_so.dir/build
+.PHONY : bootloader_so/fast
+
+#=============================================================================
+# Target rules for targets named bootloader_efi
+
+# Build rule for target.
+bootloader_efi: cmake_check_build_system
+	$(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 bootloader_efi
+.PHONY : bootloader_efi
+
+# fast build rule for target.
+bootloader_efi/fast:
+	$(MAKE) $(MAKESILENT) -f bootloader/CMakeFiles/bootloader_efi.dir/build.make bootloader/CMakeFiles/bootloader_efi.dir/build
+.PHONY : bootloader_efi/fast
+
+#=============================================================================
+# Target rules for targets named kernel_obj
+
+# Build rule for target.
+kernel_obj: cmake_check_build_system
+	$(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 kernel_obj
+.PHONY : kernel_obj
+
+# fast build rule for target.
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+.PHONY : kernel_obj/fast
+
+#=============================================================================
+# Target rules for targets named kernel_elf
+
+# Build rule for target.
+kernel_elf: cmake_check_build_system
+	$(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 kernel_elf
+.PHONY : kernel_elf
+
+# fast build rule for target.
+kernel_elf/fast:
+	$(MAKE) $(MAKESILENT) -f kernel/CMakeFiles/kernel_elf.dir/build.make kernel/CMakeFiles/kernel_elf.dir/build
+.PHONY : kernel_elf/fast
+
+#=============================================================================
+# Target rules for targets named kernel_bin
+
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+	$(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 kernel_bin
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+# fast build rule for target.
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+
+#=============================================================================
+# Target rules for targets named test_bootloader
+
+# Build rule for target.
+test_bootloader: cmake_check_build_system
+	$(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 test_bootloader
+.PHONY : test_bootloader
+
+# fast build rule for target.
+test_bootloader/fast:
+	$(MAKE) $(MAKESILENT) -f tests/CMakeFiles/test_bootloader.dir/build.make tests/CMakeFiles/test_bootloader.dir/build
+.PHONY : test_bootloader/fast
+
+#=============================================================================
+# Target rules for targets named run_tests
+
+# Build rule for target.
+run_tests: cmake_check_build_system
+	$(MAKE) $(MAKESILENT) -f CMakeFiles/Makefile2 run_tests
+.PHONY : run_tests
+
+# fast build rule for target.
+run_tests/fast:
+	$(MAKE) $(MAKESILENT) -f tests/CMakeFiles/run_tests.dir/build.make tests/CMakeFiles/run_tests.dir/build
+.PHONY : run_tests/fast
+
+# Help Target
+help:
+	@echo "The following are some of the valid targets for this Makefile:"
+	@echo "... all (the default if no target is provided)"
+	@echo "... clean"
+	@echo "... depend"
+	@echo "... edit_cache"
+	@echo "... install"
+	@echo "... install/local"
+	@echo "... install/strip"
+	@echo "... list_install_components"
+	@echo "... rebuild_cache"
+	@echo "... test"
+	@echo "... bootloader_efi"
+	@echo "... image"
+	@echo "... kernel_bin"
+	@echo "... qemu"
+	@echo "... qemu-debug"
+	@echo "... qemu-gdb"
+	@echo "... qemu-uefi-test"
+	@echo "... run_tests"
+	@echo "... bootloader_obj"
+	@echo "... bootloader_so"
+	@echo "... kernel_elf"
+	@echo "... kernel_obj"
+	@echo "... test_bootloader"
+.PHONY : help
+
+
+
+#=============================================================================
+# Special targets to cleanup operation of make.
+
+# Special rule to run CMake to check the build system integrity.
+# No rule that depends on this can have commands that come from listfiles
+# because they might be regenerated.
+cmake_check_build_system:
+	$(CMAKE_COMMAND) -S$(CMAKE_SOURCE_DIR) -B$(CMAKE_BINARY_DIR) --check-build-system CMakeFiles/Makefile.cmake 0
+.PHONY : cmake_check_build_system
+
diff --git a/cmake-build/Testing/Temporary/CTestCostData.txt b/cmake-build/Testing/Temporary/CTestCostData.txt
new file mode 100644
index 0000000..eac3007
--- /dev/null
+++ b/cmake-build/Testing/Temporary/CTestCostData.txt
@@ -0,0 +1,2 @@
+test_bootloader 1 0.00139881
+---
diff --git a/cmake-build/bin/test_bootloader b/cmake-build/bin/test_bootloader
new file mode 100755
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+	cd /home/runner/work/MetalOS/MetalOS/cmake-build && $(MAKE) $(MAKESILENT) -f tests/CMakeFiles/run_tests.dir/build.make tests/CMakeFiles/run_tests.dir/build
+.PHONY : run_tests/fast
+
+unit/test_bootloader.o: unit/test_bootloader.c.o
+.PHONY : unit/test_bootloader.o
+
+# target to build an object file
+unit/test_bootloader.c.o:
+	cd /home/runner/work/MetalOS/MetalOS/cmake-build && $(MAKE) $(MAKESILENT) -f tests/CMakeFiles/test_bootloader.dir/build.make tests/CMakeFiles/test_bootloader.dir/unit/test_bootloader.c.o
+.PHONY : unit/test_bootloader.c.o
+
+unit/test_bootloader.i: unit/test_bootloader.c.i
+.PHONY : unit/test_bootloader.i
+
+# target to preprocess a source file
+unit/test_bootloader.c.i:
+	cd /home/runner/work/MetalOS/MetalOS/cmake-build && $(MAKE) $(MAKESILENT) -f tests/CMakeFiles/test_bootloader.dir/build.make tests/CMakeFiles/test_bootloader.dir/unit/test_bootloader.c.i
+.PHONY : unit/test_bootloader.c.i
+
+unit/test_bootloader.s: unit/test_bootloader.c.s
+.PHONY : unit/test_bootloader.s
+
+# target to generate assembly for a file
+unit/test_bootloader.c.s:
+	cd /home/runner/work/MetalOS/MetalOS/cmake-build && $(MAKE) $(MAKESILENT) -f tests/CMakeFiles/test_bootloader.dir/build.make tests/CMakeFiles/test_bootloader.dir/unit/test_bootloader.c.s
+.PHONY : unit/test_bootloader.c.s
+
+# Help Target
+help:
+	@echo "The following are some of the valid targets for this Makefile:"
+	@echo "... all (the default if no target is provided)"
+	@echo "... clean"
+	@echo "... depend"
+	@echo "... edit_cache"
+	@echo "... install"
+	@echo "... install/local"
+	@echo "... install/strip"
+	@echo "... list_install_components"
+	@echo "... rebuild_cache"
+	@echo "... test"
+	@echo "... run_tests"
+	@echo "... test_bootloader"
+	@echo "... unit/test_bootloader.o"
+	@echo "... unit/test_bootloader.i"
+	@echo "... unit/test_bootloader.s"
+.PHONY : help
+
+
+
+#=============================================================================
+# Special targets to cleanup operation of make.
+
+# Special rule to run CMake to check the build system integrity.
+# No rule that depends on this can have commands that come from listfiles
+# because they might be regenerated.
+cmake_check_build_system:
+	cd /home/runner/work/MetalOS/MetalOS/cmake-build && $(CMAKE_COMMAND) -S$(CMAKE_SOURCE_DIR) -B$(CMAKE_BINARY_DIR) --check-build-system CMakeFiles/Makefile.cmake 0
+.PHONY : cmake_check_build_system
+
diff --git a/kernel/CMakeLists.txt b/kernel/CMakeLists.txt
index 9c4d380..72e139d 100644
--- a/kernel/CMakeLists.txt
+++ b/kernel/CMakeLists.txt
@@ -63,9 +63,11 @@ add_executable(kernel_elf $<TARGET_OBJECTS:kernel_obj> ${KERNEL_ASM_OBJECTS})
 set_target_properties(kernel_elf PROPERTIES
     OUTPUT_NAME metalos.elf
     LINKER_LANGUAGE C
+    POSITION_INDEPENDENT_CODE OFF
 )
 target_link_options(kernel_elf PRIVATE
     -nostdlib
+    -no-pie
     -T ${CMAKE_CURRENT_SOURCE_DIR}/linker.ld
 )